Bioinformatics Softwares

Bioinformatics softwares developed at NABI :

Software Name: SSFinder

Publication Title: SSFinder: High Throughput CRISPR-Cas Target Sites Prediction Tool

Publication Abstract: Clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein (Cas) system facilitates targeted genome editing in organisms. Despite high demand of this system, finding a reliable tool for the determination of specific target sites in large genomic data remained challenging. Here, we report SSFinder, a python script to perform high throughput detection of specific target sites in large nucleotide datasets.The SSFinder is a user-friendly tool, compatible with Windows, Mac OS, and Linux operating systems, and freely available online.

Publication Download Link: Download (PDF File, 1.32mb)

Software Download Link: Download (Zip file, 2kb)